13:00:00 #startmeeting NeuroFedora 2021-03-15 13:00:01 Meeting started Mon Mar 15 13:00:00 2021 UTC. 13:00:01 This meeting is logged and archived in a public location. 13:00:01 The chair is omnidapps. Information about MeetBot at http://wiki.debian.org/MeetBot. 13:00:01 Useful Commands: #action #agreed #halp #info #idea #link #topic. 13:00:01 The meeting name has been set to 'neurofedora_2021-03-15' 13:00:09 #meetingname neurofedora 13:00:09 The meeting name has been set to 'neurofedora' 13:00:48 #chairs FranciscoD iztokf 13:01:11 #chair FranciscoD iztokf[m] 13:01:11 Current chairs: FranciscoD iztokf[m] omnidapps 13:01:26 Anyone else here? :) 13:01:54 ping @MeWjOr 13:01:57 .members neuro-sig 13:01:58 FranciscoD: Members of neuro-sig: alciregi @ankursinha bizdelnick blackfile bt0dotninja fangq +gicmo @ignatenkobrain ilgrad iztokf +lbazan major mhough nerdsville sagitter sergiopr victortyau +zbyszek 13:02:06 achilleas ^ 13:02:45 Here 13:02:50 In the meantime I'll add the info topics? FranciscoD? 13:02:56 You're chaired already iztokf[m] :) 13:02:57 +1 13:03:05 #topic Agenda 13:03:15 #info New introductions and roll call. 13:03:20 #info Tasks from last week's meeting. 13:03:25 #info Open Pagure tickets. 13:03:31 #info Open bugs check. 13:03:36 #info Open package reviews check. 13:03:48 What is koschei? 13:04:22 #info Koschei packages check. 13:04:34 #info CompNeuro lab compose status check 13:04:44 #info Neuroscience query of the week 13:04:49 #info Next meeting day, and chair. 13:04:54 #info Open Floor 13:04:57 omnidapps: koschei is the CI that tests packages when deps etc. are updated :) 13:05:20 awesome... pinging one more time then I guess we can get started 13:05:28 .members neuro-sig meeting :) 13:05:29 omnidapps: Members of neuro-sig meeting :): 13:05:37 lol 13:05:49 .members neuro-sig 13:05:50 omnidapps: Members of neuro-sig: alciregi @ankursinha bizdelnick blackfile bt0dotninja fangq +gicmo @ignatenkobrain ilgrad iztokf +lbazan major mhough nerdsville sagitter sergiopr victortyau +zbyszek 13:06:19 guessing it's just us, but do let me know if someone else joins in ^.^ 13:06:32 #topic New introductions and roll call 13:07:43 #info Ankur Sinha (FAS: ankursinha, IRC nick: FranciscoD); TZ=UTC; NeuroFedora, Fedora Join, etc. 13:09:00 Hey! Am busy today with some work... 13:09:07 Cannot join :'( 13:09:08 #info Iztok Fister Jr. (FAS: iztokf); TZ=UTC+1; NeuroFedora, Python packaging 13:09:15 #info Josh Santos (FAS: nerdsville, IRC: omnidapps, Telegram: thatnerdjosh); TZ=UTC+7; NeuroFedora volunteer intern, elections, developer, etc. 13:09:57 No worries @MeWjOr :) 13:10:11 Guess that's us, we ok to move on to next topic? 13:10:45 +1 13:10:48 #topic Tasks from last meeting 13:11:05 #info Last meeting minutes are here: https://meetbot.fedoraproject.org/fedora-neuro/2021-03-01/neurofedora.2021-03-01-13.00.html 13:11:38 1 sec 13:11:47 1. omnidapps MeWjOr : look into Venus to ascertain how much work migration from Pluto would be -- work in progress 13:11:59 This one, I have no updates on, still work in progress 13:12:56 But, MeWjOr did start to get Pluto running and started on looking at templates for migration 13:13:34 omnidapps: if they're still WIP, please use the action command to reassign them to the folks 13:13:51 yup, was just providing notes for now, thanks! :) 13:14:19 #info MeWjOr finish up template migration analysis for pluto migration 13:15:05 #info omnidapps reach out to figure out where help is needed (if any) on pluto migration - WIP 13:15:34 #info omnidapps work on updating matplotlib-scalebar -- Done last week (update from last minutes) 13:16:01 FranciscoD ping https://bugzilla.redhat.com/show_bug.cgi?id=1809405 for updates 13:16:23 we did that 13:16:33 the reporter needs to work with upstream a bit 13:16:46 yup I just saw your comment, great 13:16:54 I'm afraid sumatra is a sort of dead project now, so we may need to drop that from the list :( 13:17:05 Drop from our task list? 13:17:16 should I do an info update to done for this? 13:18:22 #info FranciscoD ping https://bugzilla.redhat.com/show_bug.cgi?id=1809405 for updates -- Done, seems this package is obsolete, pending word back if we should continue to work on this task 13:18:42 FranciscoD file a bug with infra about neuro-sig packages not marked in Koschei -- WIP: mizdebsk is looking into it 13:18:49 How's this looking? 13:19:17 Also a WIP: caused by pagure API changes 13:19:29 https://pagure.io/fedora-infrastructure/issue/9664 13:20:14 #info Koschei not listing neuro-fedora packages https://pagure.io/fedora-infrastructure/issue/9664 -- WIP mizdebsk is on this one 13:20:43 https://pagure.io/fedora-kickstarts/pull-request/759 13:20:56 Looks done, is this good? 13:21:17 yep, comp neuro stuff is all done 13:21:28 #info https://pagure.io/fedora-kickstarts/pull-request/759 -- done 13:22:11 https://bugzilla.redhat.com/show_bug.cgi?id=1849706 13:22:42 WIP I'm afraid 13:22:46 k 13:22:46 please re-assign 13:23:02 is this a good one for me to take? 13:23:27 or iztokf[m] want it? 13:24:16 the spec needs work, I'm afraid 13:24:26 I was working with the reporter (see the GH PR etc.), but they dropped out 13:24:35 So I'm going to package it myself and submit a review 13:24:56 OK. You can count on me also for review. 13:24:58 ah, assign to you again, you meant, got it 13:25:05 sounds good :) 13:25:19 I will review the new version of package submitted by Ankur. 13:25:28 #action Package bluepyopt: https://bugzilla.redhat.com/show_bug.cgi?id=1849706 (MeWjOr, 13:22:10) -- FranciscoD to repackage, iztokf[m] to review 13:25:34 did I do that right? 13:25:38 thanks, I'll hopefully get to work on it this month. Got the COMBINE Harmony meeting coming up next week, so we're busy preparing for that :) 13:25:51 omnidapps: I think its action 13:25:56 Just send me reminder for review when finished. 13:26:07 #undo 13:26:07 Removing item from minutes: ACTION by omnidapps at 13:25:28 : Package bluepyopt: https://bugzilla.redhat.com/show_bug.cgi?id=1849706 (MeWjOr, 13:22:10) -- FranciscoD to repackage, iztokf[m] to review 13:26:21 omnidapps: here's the command reference: https://fedoraproject.org/wiki/Meeting:Guide#MeetBot_Commands 13:26:24 #action FranciscoD, iztokf https://bugzilla.redhat.com/show_bug.cgi?id=1849706 -- FranciscoD to repackage, iztokf[m] to review 13:26:35 ah thanks 13:26:48 #undo 13:26:48 Removing item from minutes: ACTION by omnidapps at 13:26:24 : FranciscoD, iztokf https://bugzilla.redhat.com/show_bug.cgi?id=1849706 -- FranciscoD to repackage, iztokf[m] to review 13:27:19 #action FranciscoD repackage bluepyopt per https://bugzilla.redhat.com/show_bug.cgi?id=1849706 13:27:26 ++ 13:27:52 Alright, should I follow through MeWjOr WiP tasks as WiP til he can respond about them? :) 13:28:07 omnidapps: best to quickly reassign them and move on :) 13:28:16 (so that they can be checked on in future meetings) 13:28:18 #info MeWjOr complete https://bugzilla.redhat.com/show_bug.cgi?id=1821189 : snakemake -- WIP, more deps 13:28:34 #action MeWjOr Fix deps for snakemake and proceed with the review. 13:28:38 ok moving on 13:28:50 #topic Open Pagure tickets. 13:29:16 #info Tickets marked for discussion: https://pagure.io/neuro-sig/NeuroFedora/issues?status=Open&tags=S%3A+Next+meeting 13:29:56 #info Presence at the INCF neuroinformatics assembly: https://pagure.io/neuro-sig/NeuroFedora/issue/427 13:30:06 #undo 13:30:06 Removing item from minutes: INFO by omnidapps at 13:29:56 : Presence at the INCF neuroinformatics assembly: https://pagure.io/neuro-sig/NeuroFedora/issue/427 13:30:08 https://pagure.io/neuro-sig/NeuroFedora/issue/427 13:30:36 How is this looking FranciscoD 13:30:43 they've just opened registration 13:30:56 and I need to attend it for the INCF Software WG anyway, so we'll submit a poster or something here 13:31:10 I need to check up what track etc would be best. Please assign the ticket to me 13:31:16 k 13:31:21 and a task too for the logs I guess 13:31:37 #info FranciscoD https://pagure.io/neuro-sig/NeuroFedora/issue/427 -- WIP 13:31:54 #info INCF Assembly: Deadline for abstract submission: 31st March 2021 13:31:58 Can I even assign it to you? 13:32:18 you already assigned 13:32:21 omnidapps: the ticket is already assigned to me (but yes, you should be able to assign tickets to folks) 13:32:22 yeh 13:32:48 #info Use Pluto instead of Venus: https://pagure.io/neuro-sig/NeuroFedora/issue/421 -- WIP 13:32:50 Ok moving on 13:33:11 #topic Open bugs check. 13:33:34 oops x) 13:33:39 I missed one task, we can undo 13:33:43 https://tinyurl.com/neurofedora-bugs 13:33:51 https://pagure.io/neuro-sig/NeuroFedora/issue/318 13:34:21 which one? 13:34:23 the reading list? 13:34:26 #318 yea 13:34:38 we can deal with that later in the "query of the week" topic 13:34:41 k 13:34:49 I think we tend to do that anyway 13:35:13 Open bugs... there is a lot here 13:35:59 omnidapps: we prioritise any bugs: i.e. crashes etc 13:36:15 bugs for new versions etc are not too important: we get to them whenever we find the time 13:36:21 https://bugzilla.redhat.com/show_bug.cgi?id=1926362 13:36:25 (unless an update includes important bug-fixes, that is) 13:36:28 https://bugzilla.redhat.com/show_bug.cgi?id=1926356 13:36:48 These too since new versions python issues? 13:36:59 Yeh, they're important for F35 13:37:04 when python3.10 will be default 13:37:18 ok so we got some time, or should start considering now? 13:37:31 if folks have time, please work on them 13:37:40 k, adding item and moving on 13:37:45 the python-sig starts filing them super-early so that we maintainers have time to work with upstream 13:38:03 these two look like simple fixes, could send patches upstream 🤔 13:38:38 * FranciscoD adds sciunit bug to tasklist 13:38:43 #info let's work on python 3.10 issues when we have time, will be urgent for F35 support https://tinyurl.com/neurofedora-bugs 13:38:57 ++ 13:39:14 #info sciunit upgrade should be simple -- FranciscoD to work on this 13:39:16 moving on :) 13:39:36 #topic Open package reviews check. 13:40:08 Is this where I look? https://bugzilla.redhat.com/show_bug.cgi?id=fedora-neuro 13:40:11 pagure.pull-request.comment.added -- ankursinha commented on PR #1 on rpms/python-stdlib-list https://src.fedoraproject.org/rpms/python-stdlib-list/pull-request/1#comment-70021 13:40:22 pagure.git.receive -- ankursinha pushed 1 commit to rpms/python-stdlib-list (rawhide) https://src.fedoraproject.org/rpms/python-stdlib-list/tree/rawhide 13:40:25 pagure.pull-request.comment.added -- ankursinha commented on PR #1 on rpms/python-stdlib-list https://src.fedoraproject.org/rpms/python-stdlib-list/pull-request/1#comment-70022 13:40:26 pagure.pull-request.closed -- ankursinha merged pull request #1 on rpms/python-stdlib-list https://src.fedoraproject.org/rpms/python-stdlib-list/pull-request/1 13:40:38 where do I look for package review checks 13:40:39 omnidapps: yes, in that tracker bugs, look at the "blocking" bugs 13:40:43 k 13:41:01 you may need to click "show advanced fields" on the right 13:41:14 and then you'll see a huge list of "depends on" bugs pop up XD 13:41:19 most are closed, luckily :P 13:41:25 https://bugzilla.redhat.com/show_bug.cgi?id=1809405 13:41:44 same from earlier 13:41:48 got to drop it from the list 13:42:12 if you hover your mouse over the link, it should show the bug summary etc 13:42:39 k they all show as assigned so we should be good to move on? 13:42:52 yeh, I guess so: they're all WIPs 13:43:13 #info Look here at depends on field for all of the in progress package reviews: https://bugzilla.redhat.com/show_bug.cgi?id=fedora-neuro 13:43:40 #topic Koschei packages check. 13:43:47 #info Neuro-sig packages on Koschei: https://koschei.fedoraproject.org/groups/neuro-sig 13:43:49 bugzilla also has the "tree view" which shows full descriptions etc 13:44:01 This one we can move on from since it seems this is still WIP, right? 13:44:10 Yeh, it's not tracking all our packages at the moment :( 13:44:29 #info see open task to work on fixing our package visibility 13:44:39 pagure.git.receive -- ankursinha pushed 1 commit to rpms/python-stdlib-list (f34) https://src.fedoraproject.org/rpms/python-stdlib-list/tree/f34 13:44:42 #topic CompNeuro lab compose status check 13:44:44 This is done right? 13:45:18 I think we're in good shape there 13:45:20 https://koji.fedoraproject.org/koji/packageinfo?packageID=30691 13:45:24 yup it looks green 13:45:33 rawhide + f34 both passing 👏 13:45:37 #info looking good, image builds here https://koji.fedoraproject.org/koji/packageinfo?packageID=30691 13:45:47 #topic Neuroscience query of the week 13:45:58 #info If you find anything interesting, add it to this ticket here: https://pagure.io/neuro-sig/NeuroFedora/issue/318 13:46:18 FranciscoD anything you want to share here ^.^? 13:46:23 pagure.issue.comment.added -- ankursinha commented on ticket neuro-sig/NeuroFedora#318: "NeuroFedora reading/listening list" https://pagure.io/neuro-sig/NeuroFedora/issue/318#comment-721151 13:46:28 just this: https://docs.neuroml.org/Events/202103-Harmony.html 13:46:34 for anyone that would like to get started with NeuroML 13:46:50 not seen anything else recently, but not had much time to keep up with RSS feeds :( 13:47:00 #info For those interested in starting with NeuroML: https://docs.neuroml.org/Events/202103-Harmony.html 13:47:07 Is NeuroML easy? 13:47:14 I am new to ML in general x) 13:47:18 but sounds cool 13:47:36 it isn't ML related at all :P 13:47:37 pagure.commit.flag.added -- Build completed added a flag on the commit 44285715 of the project rpms/python-stdlib-list https://src.fedoraproject.org/rpms/python-stdlib-list/c/44285715685eeeb8d3f1874ec40ccec0e8def1c9 13:47:39 it's a modelling language 13:47:41 ah 13:47:50 for computational models in neuroscience :) 13:48:00 the next version will be more neural-network friendly perhaps 13:48:13 Alright folks, looks like we are done with this meeting, time to plan next day/time/chair :) then we can have an open floor 13:48:14 https://github.com/OCNS/SoftwareWG/discussions/11 13:48:30 #info https://github.com/OCNS/SoftwareWG/discussions/11 13:48:39 #topic Next meeting: time/day/chair 13:48:55 Who wants to chair :) 13:49:08 pagure.issue.comment.edited -- ankursinha edited a comment on ticket neuro-sig/NeuroFedora#318: "NeuroFedora reading/listening list" https://pagure.io/neuro-sig/NeuroFedora/issue/318#comment-721151 13:49:35 in 2 weeks, let me check my calendar once 13:50:03 Yeh, I should be able to do it 13:50:08 03/29/2021 @ 13:00 UTC ok? 13:50:33 +1 13:50:44 +1 13:50:44 #info Next meeting will be chaired by FranciscoD and will occur on 29/03/2021 @13:00 UTC 13:51:06 pagure.commit.flag.added -- Build completed added a flag on the commit 44285715 of the project rpms/python-stdlib-list https://src.fedoraproject.org/rpms/python-stdlib-list/c/44285715685eeeb8d3f1874ec40ccec0e8def1c9 13:51:09 #action FranciscoD to chair next meeting 13:51:16 #action omnidapps to send out meeting logs 13:51:24 #topic open-floor 13:51:43 9 mins remaining *phew* 13:52:03 :D 13:52:50 thanks very much omnidapps 13:53:00 I guess a random sort of related (?) thing I started to read is "Algorithms to Live By" 13:53:06 That book has been pretty cool 13:53:07 #action omnidapps send out logs to mailing lists 13:53:14 oo, sounds good. Got a link? 13:53:29 https://www.amazon.com/Algorithms-Live-Computer-Science-Decisions/dp/1627790365 13:53:41 * FranciscoD adds to reading list 13:53:51 yeah it's a really awesome read 13:54:21 Anything else anyone got to discuss, guess we could end 5 mins early if not ^.^ 13:54:35 added to my super long list of books to read on goodreads: https://www.goodreads.com/user/show/32360473-ankur 13:54:46 is there a FOSS alternative to goodreads? 🤔 13:54:57 hehe, I'd move this up a little bit :P it's definitely pretty useful I'd say 13:55:03 idk, just now learned about goodreads 13:55:33 Alright thank you guys! :) 13:55:41 thanks omnidapps , good to close :) 13:55:42 #endmeeting